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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33820174_33827215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33820174 - 33827215

Intron Length:

7042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

CTGTCCTTCACA

Flanking Amino Acid:

DSSSQPRTSQASVVSERDYE

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

89.2

0.88

0.8

81.2

36.5

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

0.56

1.8

74.81

43.1

Associated Gene:

Gene:

DNAJC17

Ensembl Gene ID:

ENSAPLG00000003714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027805

33819887 - 33836350

16464

ENSAPLT00000003864

33819949 - 33836350

16402