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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33828193_33828873_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33828193 - 33828873

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCCTGTCT

5'SS Class:

weak_major

3'SS Sequence:

TCTCTCCTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TCGTTATTAACT

Flanking Amino Acid:

KDVLLRILQKYGDVLNLLIS

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.14

1.4

42.7

Major BPS

81.9

0.79

0.8

81.9

Major PPT

77.9

0.63

0.8

73.4

30.1

Minor 5ss

33.8

-1.8

3.4

49.2

46.5

Minor BPS

67.9

0.64

1.6

80.43

41.6

Associated Gene:

Gene:

DNAJC17

Ensembl Gene ID:

ENSAPLG00000003714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027805

33819887 - 33836350

16464

ENSAPLT00000003864

33819949 - 33836350

16402