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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33828952_33829465_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33828952 - 33829465

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

ACAAAATTAACT

Flanking Amino Acid:

AEGRITPKLKLKWKCRKEDE

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

74.4

35.9

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

77.2

0.61

0.9

69.9

40.9

Minor 5ss

35.3

-1.7

3.3

48.7

41.3

Minor BPS

49.8

0.06

1.8

66.83

42.9

Associated Gene:

Gene:

DNAJC17

Ensembl Gene ID:

ENSAPLG00000003714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027805

33819887 - 33836350

16464

ENSAPLT00000003864

33819949 - 33836350

16402