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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33831617_33831993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33831617 - 33831993

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATAAAT

5'SS Class:

major

3'SS Sequence:

TTTTTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTGTTTTAATT

Flanking Amino Acid:

LDEKRKKVKLDLEAREREAQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

75.3

33.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

93.2

0.97

0.6

89.1

19.8

Minor 5ss

35.4

-1.7

3.1

46.5

42.9

Minor BPS

63.6

0.5

1.3

72.81

39.3

Associated Gene:

Gene:

DNAJC17

Ensembl Gene ID:

ENSAPLG00000003714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027805

33819887 - 33836350

16464

ENSAPLT00000003864

33819949 - 33836350

16402