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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33832082_33833654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33832082 - 33833654

Intron Length:

1573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

GGATCTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

GTGTACTTACTC

Flanking Amino Acid:

LAVLTDAAARAAYDKVRKAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

73.4

43.3

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

63.3

0.3

1.1

57.5

43.1

Minor 5ss

35.4

-1.7

3.2

40.5

45.5

Minor BPS

53.5

0.09

1.8

63.89

41.9

Associated Gene:

Gene:

DNAJC17

Ensembl Gene ID:

ENSAPLG00000003714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027805

33819887 - 33836350

16464

ENSAPLT00000003864

33819949 - 33836350

16402