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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33833714_33834387_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33833714 - 33834387

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTAATTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCTTCTAATT

Flanking Amino Acid:

PDKNPDNPRAAEVFHQLSQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

33.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.9

0.63

0.9

69.6

40.4

Minor 5ss

37.3

-1.4

47.8

47.6

Minor BPS

61.7

0.44

1.6

81.49

Associated Gene:

Gene:

DNAJC17

Ensembl Gene ID:

ENSAPLG00000003714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003864

33819949 - 33836350

16402

ENSAPLT00000027805

33819887 - 33836350

16464