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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33868821_33870980_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33868821 - 33870980

Intron Length:

2160

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCAGATGTT

5'SS Class:

major

3'SS Sequence:

GAAATGCCTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

AAATGCCTGAAG

Flanking Amino Acid:

MLLTSENHTAVTEFI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.2

76.6

35.2

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

49.7

-0

1.1

46.1

41.2

Minor 5ss

26.4

-2.7

4.5

45.5

Minor BPS

41.3

-0.8

2.1

44.6

40.7

Associated Gene:

Gene:

OR5AS1

Ensembl Gene ID:

ENSAPLG00000000749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000729

33867883 - 33870996

3114