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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33885891_33886915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33885891 - 33886915

Intron Length:

1025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTGCC

5'SS Class:

major

3'SS Sequence:

TTTCGCCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGCCAT

U12 Branch Point Sequence:

TTCGCCCCAAAG

Flanking Amino Acid:

VLERYFLGSTGVTVTVAPDV

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

65.9

38.5

Major BPS

46.8

-0.2

1.4

53.8

41.9

Major PPT

64.5

0.33

63.9

31.7

Minor 5ss

45.6

-0.5

2.9

62.3

42.5

Minor BPS

44.7

-0.5

2.1

53.67

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003978

33874937 - 33889834

14898