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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33901797_33908254_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33901797 - 33908254

Intron Length:

6458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GGCTTCTCACCC

Flanking Amino Acid:

VLGQSAVGKTEMIYRHMAVI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

0.87

0.8

85.6

Major PPT

79.2

0.66

0.8

36.5

Minor 5ss

31.4

-2.1

3.1

46.4

Minor BPS

47.6

-0.2

1.8

55.57

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003950

33900760 - 33908351

7592