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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33917465_33918144_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33917465 - 33918144

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

CATTCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TCTCTTTCCATT

Flanking Amino Acid:

WKRHNYQRKKIITNPQTVLR

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

75.3

35.6

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

86.7

0.83

0.7

84.4

Minor 5ss

41.4

-1

3.1

56.7

41.9

Minor BPS

45.7

-0.2

1.9

64.38

41.1

Associated Gene:

Gene:

MRPL21

Ensembl Gene ID:

ENSAPLG00000003685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028085

33917400 - 33933171

15772

ENSAPLT00000003777

33917400 - 33933068

15669