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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33924744_33927723_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33924744 - 33927723

Intron Length:

2980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TCTTCCCTGATG

Flanking Amino Acid:

DPAEEAKYHAEVVQKVNNMI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

74.2

36.3

Major BPS

0.72

38.9

Major PPT

72.1

0.5

66.7

39.5

Minor 5ss

33.1

-1.9

3.8

49.2

47.3

Minor BPS

60.5

0.19

1.8

67.15

Associated Gene:

Gene:

MRPL21

Ensembl Gene ID:

ENSAPLG00000003685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028085

33917400 - 33933171

15772

ENSAPLT00000003777

33917400 - 33933068

15669