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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33934754_33936576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33934754 - 33936576

Intron Length:

1823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

CTGTCTTTAACT

Flanking Amino Acid:

AELPYNSFGPGDILGLYDSF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

0.81

0.8

80.4

31.5

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

80.9

1.05

1.1

87.35

38.8

Associated Gene:

Gene:

IGHMBP2

Ensembl Gene ID:

ENSAPLG00000003251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041604

33934177 - 33974582

40406

ENSAPLT00000003345

33933067 - 33974582

41516