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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33936770_33937471_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33936770 - 33937471

Intron Length:

702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGGGT

5'SS Class:

major

3'SS Sequence:

TCTTCTTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GTGCATATAACC

Flanking Amino Acid:

ANDVTYNRLKKALNTLKQYR

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

70.6

39.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

82.2

0.72

0.9

80.1

31.8

Minor 5ss

32.7

-2

3.7

46.6

43.3

Minor BPS

47.8

-0.1

1.8

58.81

39.6

Associated Gene:

Gene:

IGHMBP2

Ensembl Gene ID:

ENSAPLG00000003251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041604

33934177 - 33974582

40406

ENSAPLT00000003345

33933067 - 33974582

41516