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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33937570_33945267_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33937570 - 33945267

Intron Length:

7698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAACC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACCCAA

U12 Branch Point Sequence:

GGGCTGAGAAAT

Flanking Amino Acid:

SSDPTSFSETKPLKFYNDSL

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

75.3

32.6

Major BPS

48.6

-0

1.1

56.4

30.9

Major PPT

71.1

0.48

0.9

61.7

Minor 5ss

36.5

-1.5

2.9

45.8

35.7

Minor BPS

34.7

-1

2.1

46.16

38.3

Associated Gene:

Gene:

IGHMBP2

Ensembl Gene ID:

ENSAPLG00000003251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041604

33934177 - 33974582

40406

ENSAPLT00000003345

33933067 - 33974582

41516