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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33946062_33949936_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33946062 - 33949936

Intron Length:

3875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTACGTGTC

5'SS Class:

major

3'SS Sequence:

TTTTATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTTACA

Flanking Amino Acid:

DIRKDIDQAFAKTKKAQDKG

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.4

63.4

41.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.7

0.96

0.7

87.8

29.3

Minor 5ss

37.7

-1.4

3.5

52.3

39.4

Minor BPS

65.1

0.47

1.8

80.31

Associated Gene:

Gene:

IGHMBP2

Ensembl Gene ID:

ENSAPLG00000003251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041604

33934177 - 33974582

40406

ENSAPLT00000003345

33933067 - 33974582

41516