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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33952589_33962325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33952589 - 33962325

Intron Length:

9737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGAGC

5'SS Class:

major

3'SS Sequence:

TTTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

CACTTCTGACTT

Flanking Amino Acid:

KQLPPTIISHKAAASGLSLS

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.6

39.9

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

90.4

0.91

0.6

85.3

Minor 5ss

34.3

-1.8

3.2

43.3

38.2

Minor BPS

47.8

-0

1.7

60.85

43.5

Associated Gene:

Gene:

IGHMBP2

Ensembl Gene ID:

ENSAPLG00000003251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041604

33934177 - 33974582

40406

ENSAPLT00000003345

33933067 - 33974582

41516