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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33962509_33966957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33962509 - 33966957

Intron Length:

4449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

CCTTTCCCAACA

Flanking Amino Acid:

AHPSVAQHLLKDLPGVTSTE

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

78.6

28.8

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

91.5

0.93

0.6

87.3

Minor 5ss

34.7

-1.7

3.2

43.7

38.1

Minor BPS

49.7

-0

1.9

63.62

42.9

Associated Gene:

Gene:

IGHMBP2

Ensembl Gene ID:

ENSAPLG00000003251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041604

33934177 - 33974582

40406

ENSAPLT00000003345

33933067 - 33974582

41516