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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33971981_33972232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33971981 - 33972232

Intron Length:

252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GCCCTGTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

GGGTGCCTAACT

Flanking Amino Acid:

SKKKDKSEAKGKPAVKTGAE

Intron Amino Acid Position:

861

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.3

40.8

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

67.6

0.4

0.9

61.1

35.1

Minor 5ss

35.5

-1.7

3.2

50.7

45.7

Minor BPS

0.08

2.1

70.44

45.8

Associated Gene:

Gene:

IGHMBP2

Ensembl Gene ID:

ENSAPLG00000003251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041604

33934177 - 33974582

40406

ENSAPLT00000003345

33933067 - 33974582

41516