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Intron Name: Anas_platyrhynchos_platyrhynchos_5_33972418_33974185_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33972418 - 33974185

Intron Length:

1768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGCCTG

5'SS Class:

major

3'SS Sequence:

TCTCTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TGTTTCCCACCC

Flanking Amino Acid:

RYCLSHHVPEVHGCGEKAKA

Intron Amino Acid Position:

923

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

63.8

47.8

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

80.6

0.69

0.7

31.9

Minor 5ss

40.4

-1.1

3.3

55.9

48.3

Minor BPS

46.4

-0.2

2.1

63.86

41.4

Associated Gene:

Gene:

IGHMBP2

Ensembl Gene ID:

ENSAPLG00000003251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041604

33934177 - 33974582

40406

ENSAPLT00000003345

33933067 - 33974582

41516