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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34002302_34003301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34002302 - 34003301

Intron Length:

1000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGGTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GTGACCTACACT

Flanking Amino Acid:

NETDPFHNIWDKLDGFVPAH

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

75.1

35.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

78.3

0.64

0.9

72.9

37.4

Minor 5ss

33.3

-1.9

2.9

35.7

40.8

Minor BPS

48.7

-0

2.2

69.24

47.2

Associated Gene:

Gene:

PTDSS2

Ensembl Gene ID:

ENSAPLG00000002950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002988

33988830 - 34028051

39222