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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34003437_34006114_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34003437 - 34006114

Intron Length:

2678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAG

U12 Branch Point Sequence:

CTAAGAGGAAAA

Flanking Amino Acid:

ELFLIFILFQTVQDGRQFMK

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.9

25.6

Major BPS

62.8

0.32

1.5

69.9

35.3

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

-1.5

2.6

46.5

41.8

Minor BPS

31.7

-1.3

2.2

40.4

38.9

Associated Gene:

Gene:

PTDSS2

Ensembl Gene ID:

ENSAPLG00000002950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002988

33988830 - 34028051

39222