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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34006183_34012972_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34006183 - 34012972

Intron Length:

6790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

CTTTGCTGACAT

Flanking Amino Acid:

KDGPFSRPHPAYWRFWLCVS

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.2

30.6

Major BPS

74.6

0.61

65.6

41.4

Major PPT

81.5

0.71

0.8

77.3

31.5

Minor 5ss

45.1

-0.5

2.6

58.1

46.5

Minor BPS

46.4

-0.2

2.2

69.82

46.7

Associated Gene:

Gene:

PTDSS2

Ensembl Gene ID:

ENSAPLG00000002950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002988

33988830 - 34028051

39222