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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34057019_34057318_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34057019 - 34057318

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTGC

5'SS Class:

major

3'SS Sequence:

ACTGTGCCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

CCCTCTGAAACT

Flanking Amino Acid:

MAALCSVPPELL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

64.1

43.4

Major BPS

69.8

0.49

37.5

Major PPT

61.1

0.25

0.9

51.3

38.7

Minor 5ss

42.8

-0.8

3.2

58.8

46.1

Minor BPS

45.6

-0.2

2.3

62.23

48.4

Associated Gene:

Gene:

SIGIRR

Ensembl Gene ID:

ENSAPLG00000014220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039732

34055583 - 34059648

4066

ENSAPLT00000036975

34055583 - 34059308

3726

ENSAPLT00000014838

34056880 - 34059894

3015