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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34063337_34063688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34063337 - 34063688

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGCGGC

5'SS Class:

major

3'SS Sequence:

CCTGTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TGTACCCCATCC

Flanking Amino Acid:

FSPQSKKAREHYLNADIVTF

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

63.6

42.3

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

0.5

0.8

65.4

30.4

Minor 5ss

32.1

-2

3.2

44.8

Minor BPS

45.3

-0.3

2.1

61.58

Associated Gene:

Gene:

PKP3

Ensembl Gene ID:

ENSAPLG00000014382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015011

34061657 - 34066071

4415

ENSAPLT00000030218

34061599 - 34066110

4512

ENSAPLT00000017972

34061657 - 34066110

4454