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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34117984_34118484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34117984 - 34118484

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTGCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTAGAT

U12 Branch Point Sequence:

TTTTGCTAGATT

Flanking Amino Acid:

QAVLFGYTGFRPRWISLWIT

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

74.2

36.1

Major BPS

49.5

-0

1.3

48.6

45.1

Major PPT

86.2

0.82

0.8

83.5

31.6

Minor 5ss

29.2

-2.4

3.1

45.5

Minor BPS

57.2

0.31

2.1

82.57

39.6

Associated Gene:

Gene:

PGGHG

Ensembl Gene ID:

ENSAPLG00000015013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026191

34114902 - 34130242

15341

ENSAPLT00000018060

34114902 - 34130242

15341