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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34118583_34119036_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34118583 - 34119036

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCTGT

5'SS Class:

major

3'SS Sequence:

CATACTGGAGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TCATACTGGAGT

Flanking Amino Acid:

CFSNITEPFKIWVENSDGSG

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.3

69.7

43.7

Major BPS

0.5

1.1

71.2

35.2

Major PPT

0.05

1.1

47.5

39.9

Minor 5ss

-1

56.9

47.2

Minor BPS

47.1

-0.1

65.61

44.7

Associated Gene:

Gene:

PGGHG

Ensembl Gene ID:

ENSAPLG00000015013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020600

34114902 - 34131194

16293

ENSAPLT00000018060

34114902 - 34130242

15341

ENSAPLT00000015653

34114902 - 34132133

17232

ENSAPLT00000032486

34114902 - 34132133

17232

ENSAPLT00000026191

34114902 - 34130242

15341