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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34120868_34125432_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34120868 - 34125432

Intron Length:

4565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTTCTG

5'SS Class:

major

3'SS Sequence:

TCTCTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAA

U12 Branch Point Sequence:

GTGTACTGCAGT

Flanking Amino Acid:

SEEEQCYHIRGVMPPDEYHY

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

65.7

45.6

Major BPS

54.3

0.11

1.4

49.1

46.3

Major PPT

82.4

0.73

0.7

73.7

31.4

Minor 5ss

36.8

-1.5

3.2

50.2

Minor BPS

42.9

-0.4

2.3

62.53

46.9

Associated Gene:

Gene:

PGGHG

Ensembl Gene ID:

ENSAPLG00000015013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018060

34114902 - 34130242

15341

ENSAPLT00000015653

34114902 - 34132133

17232

ENSAPLT00000032486

34114902 - 34132133

17232

ENSAPLT00000026191

34114902 - 34130242

15341

ENSAPLT00000020600

34114902 - 34131194

16293