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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34126321_34127395_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34126321 - 34127395

Intron Length:

1075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCGATGTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ATTTCACCACCT

Flanking Amino Acid:

DYWGHVFWDQDTWVFPNILL

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

76.3

30.6

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

76.3

0.59

72.7

42.2

Minor 5ss

32.7

-2

3.1

39.4

46.5

Minor BPS

45.2

-0.2

2.3

73.1

43.1

Associated Gene:

Gene:

PGGHG

Ensembl Gene ID:

ENSAPLG00000015013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026191

34114902 - 34130242

15341

ENSAPLT00000020600

34114902 - 34131194

16293

ENSAPLT00000018060

34114902 - 34130242

15341

ENSAPLT00000015653

34114902 - 34132133

17232

ENSAPLT00000032486

34114902 - 34132133

17232