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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34127832_34128432_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34127832 - 34128432

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTTTG

5'SS Class:

major

3'SS Sequence:

CCATCCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

CTGCTCTTACTT

Flanking Amino Acid:

LHQGPDFQGAHYVYGTTLVP

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

68.9

38.5

Major BPS

69.2

0.48

37.1

Major PPT

0.52

0.8

65.9

29.9

Minor 5ss

40.6

-1.1

54.8

43.4

Minor BPS

54.1

0.21

1.7

68.18

43.5

Associated Gene:

Gene:

PGGHG

Ensembl Gene ID:

ENSAPLG00000015013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026191

34114902 - 34130242

15341

ENSAPLT00000020600

34114902 - 34131194

16293

ENSAPLT00000018060

34114902 - 34130242

15341

ENSAPLT00000015653

34114902 - 34132133

17232

ENSAPLT00000032486

34114902 - 34132133

17232