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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34128644_34129155_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34128644 - 34129155

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTGCACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAAAAA

U12 Branch Point Sequence:

GACTCTTGCACT

Flanking Amino Acid:

SCTGMSSWKKGTFSHVLQST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

49.6

-0

1.1

57.3

34.4

Major PPT

77.3

0.61

0.9

35.4

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

0.01

1.9

66.58

Associated Gene:

Gene:

PGGHG

Ensembl Gene ID:

ENSAPLG00000015013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020600

34114902 - 34131194

16293