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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34131195_34131941_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

34131195 - 34131941

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

TTTCAGCTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.1

32.7

Major BPS

63.7

0.34

1.6

39.9

Major PPT

88.6

0.87

0.7

88.2

29.1

Minor 5ss

33.9

-1.8

2.9

38.9

40.1

Minor BPS

44.3

-0.4

2.4

66.16

39.7

Associated Gene:

Gene:

PGGHG

Ensembl Gene ID:

ENSAPLG00000015013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032486

34114902 - 34132133

17232