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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34139117_34139880_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34139117 - 34139880

Intron Length:

764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGACC

5'SS Class:

strong_major

3'SS Sequence:

ACTTGTCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAC

U12 Branch Point Sequence:

TTTCTGTGGACT

Flanking Amino Acid:

VQPRVLDLQQIKGMKDRLEF

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

72.4

37.1

Major BPS

54.8

0.12

1.1

46.8

37.9

Major PPT

79.3

0.66

0.9

69.7

Minor 5ss

33.6

-1.9

3.1

44.3

43.2

Minor BPS

2.2

77.02

39.5

Associated Gene:

Gene:

PSMD13

Ensembl Gene ID:

ENSAPLG00000015241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015898

34138282 - 34146328

8047