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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34141305_34142229_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34141305 - 34142229

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGAATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TTTCCTTGAATT

Flanking Amino Acid:

QKIQLLCLMEMTFTRPANHR

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

72.8

0.51

70.1

39.3

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

71.3

0.75

1.3

86.4

33.1

Associated Gene:

Gene:

PSMD13

Ensembl Gene ID:

ENSAPLG00000015241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015898

34138282 - 34146328

8047