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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34143333_34143416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34143333 - 34143416

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTGCATTCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

ACCCTTTTAACA

Flanking Amino Acid:

GEGVYNFGELLMHPVLESLR

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

74.9

36.2

Major BPS

89.7

0.98

0.7

89.9

Major PPT

75.4

0.57

0.9

68.4

37.1

Minor 5ss

40.7

-1

2.8

49.7

41.9

Minor BPS

61.1

0.35

1.3

62.09

38.6

Associated Gene:

Gene:

PSMD13

Ensembl Gene ID:

ENSAPLG00000015241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015898

34138282 - 34146328

8047