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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34143497_34143970_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34143497 - 34143970

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCCG

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTGTTTTGAATG

Flanking Amino Acid:

LGCIDVKDLPVSEQQERAFT

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.2

66.3

45.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

93.3

0.97

0.6

89.3

19.4

Minor 5ss

40.1

-1.1

2.8

51.2

45.2

Minor BPS

59.4

0.16

1.5

63.17

39.7

Associated Gene:

Gene:

PSMD13

Ensembl Gene ID:

ENSAPLG00000015241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015898

34138282 - 34146328

8047