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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34147047_34147233_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
34147047 - 34147233

Intron Length:
187

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTGGGGGCC

5'SS Class:
major

3'SS Sequence:
TGCTTTCTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CCCTCAG

U12 Branch Point Sequence:
GCCCCCTCAGCG

Flanking Amino Acid:
AVAAGGLLAAAWRSLRERGP

Intron Amino Acid Position:
19

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.9
0.35
1.1
56.9
36.1

Major BPS
48.4
-0.1
1.5
56.9
40.5

Major PPT
85.7
0.8
0.8
80.6
31.5

Minor 5ss
23.2
-3.1
3.4
23.8
37.5

Minor BPS
45.5
-0.4
1.9
45.98
46.1

Associated Gene:

Gene:
SIRT3

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34146992 - 34151735
4744

34146992 - 34150820
3829