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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34147334_34148391_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
34147334 - 34148391

Intron Length:
1058

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGGGCTGC

5'SS Class:
major

3'SS Sequence:
CTGTTCCAAGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTCCAA

U12 Branch Point Sequence:
TCTGTTCCAAGC

Flanking Amino Acid:
SCCGMGCGAWRIQGTRPFSL

Intron Amino Acid Position:
52

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.1
60.1
41.9

Major BPS
50.4
0.01
1.4
64.5
42.8

Major PPT
67.5
0.4
1
63.7
37.1

Minor 5ss
37.4
-1.4
3.3
49.7
46.9

Minor BPS
40.3
-0.7
2
49.85
41.3

Associated Gene:

Gene:
SIRT3

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34146992 - 34151735
4744

34146992 - 34150820
3829