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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34149301_34149444_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
34149301 - 34149444

Intron Length:
144

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGTTTT

5'SS Class:
strong_major

3'SS Sequence:
TGCTGTGTTCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACCTCAT

U12 Branch Point Sequence:
TCATGCTGAGCT

Flanking Amino Acid:
YTQNIDGLERAAGIPPDRLV

Intron Amino Acid Position:
196

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.9
1.06
0.6
93
14.8

Major BPS
73.5
0.58
1
73.6
32.5

Major PPT
74.3
0.55
1
64.8
45.7

Minor 5ss
40.7
-1
3
57.8
46.8

Minor BPS
48.4
-0
2.1
69.76
46.6

Associated Gene:

Gene:
SIRT3

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34146992 - 34150820
3829

34146992 - 34151735
4744