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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34149546_34149769_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34149546 - 34149769

Intron Length:
224

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGAGTGGT

5'SS Class:
strong_major

3'SS Sequence:
GCTTTTACTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTTTAC

U12 Branch Point Sequence:
TGCCCCGTAACG

Flanking Amino Acid:
RRKFPGEDFRGDVMADKIPH

Intron Amino Acid Position:
230

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.8
0.75
1
72.2
39.5

Major BPS
74.2
0.6
1
67
39.4

Major PPT
81
0.7
0.8
78.1
35

Minor 5ss
28.5
-2.5
3.1
31.8
42.6

Minor BPS
52.9
-0
2.1
61.57
45.9

Associated Gene:

Gene:
SIRT3

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34146992 - 34150820
3829

34146992 - 34151735
4744