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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34179046_34179147_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34179046 - 34179147

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

GTGCCGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGACAT

U12 Branch Point Sequence:

TCGGCCCGGACA

Flanking Amino Acid:

SGEGAGFCGQVVLLGDCVGG

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

43.9

-0.3

1.4

46.4

Major PPT

0.34

57.6

38.5

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

45.5

-0.3

1.9

55.61

43.5

Associated Gene:

Gene:

PITPNM1

Ensembl Gene ID:

ENSAPLG00000013895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014495

34172477 - 34188176

15700