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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34179934_34180028_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34179934 - 34180028

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

CACGTGCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

CTCAGCTCACCC

Flanking Amino Acid:

ERPAELDEALGEGPSAAKAD

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

59.7

46.7

Major BPS

0.28

1.1

63.1

35.8

Major PPT

64.7

0.33

56.4

38.6

Minor 5ss

32.9

-2

2.8

31.4

42.5

Minor BPS

41.8

-0.6

2.2

50.78

46.1

Associated Gene:

Gene:

PITPNM1

Ensembl Gene ID:

ENSAPLG00000013895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014495

34172477 - 34188176

15700