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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34180343_34180503_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34180343 - 34180503

Intron Length:

161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

GTGCTGGTGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGACAAT

U12 Branch Point Sequence:

TGAGCGCTGACA

Flanking Amino Acid:

SRSSYSSQHGGGVSPQSLSE

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.4

30.8

Major BPS

1.4

59.1

44.1

Major PPT

0.2

1.2

53.4

45.8

Minor 5ss

23.1

-3.1

3.2

Minor BPS

43.2

-0.5

2.4

56.7

42.3

Associated Gene:

Gene:

PITPNM1

Ensembl Gene ID:

ENSAPLG00000013895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014495

34172477 - 34188176

15700