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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34180462_34180511_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34180462 - 34180511

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCA|GCACGGAGG

5'SS Class:

weak_major

3'SS Sequence:

AGCAGGACCCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTGAG

U12 Branch Point Sequence:

TGAGCAGGACCC

Flanking Amino Acid:

STSSRSSYSSQLGAAAAADT

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.4

53.7

43.5

Major BPS

45.9

-0.2

1.7

42.8

49.4

Major PPT

49.6

-0

36.1

39.7

Minor 5ss

22.5

-3.2

35.4

42.2

Minor BPS

35.5

-1.1

2.3

46.01

42.2

Associated Gene:

Gene:

PITPNM1

Ensembl Gene ID:

ENSAPLG00000013895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036624

34179766 - 34186563

6798