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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34181135_34182880_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34181135 - 34182880

Intron Length:

1746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGCGTAAG

5'SS Class:

major

3'SS Sequence:

TCTCTTCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GGGTGCTGATTC

Flanking Amino Acid:

SAAEKRQRILDTIDIVRDPI

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

65.1

42.5

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

80.7

0.69

0.7

73.2

31.8

Minor 5ss

28.1

-2.5

2.7

24.3

37.1

Minor BPS

42.6

-0.5

48.6

41.4

Associated Gene:

Gene:

PITPNM1

Ensembl Gene ID:

ENSAPLG00000013895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014495

34172477 - 34188176

15700

ENSAPLT00000036624

34179766 - 34186563

6798

ENSAPLT00000033033

34176765 - 34187276

10512