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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34187793_34188189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34187793 - 34188189

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

TCTCCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TGTTCCTAAACC

Flanking Amino Acid:

YREEGILGFFAGLIPRLLGD

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.3

65.8

40.2

Major BPS

72.7

0.57

72.1

31.1

Major PPT

84.9

0.79

0.7

76.7

31.9

Minor 5ss

30.8

-2.2

3.2

37.1

40.4

Minor BPS

75.6

0.78

1.6

83.37

36.3

Associated Gene:

Gene:

MTCH2

Ensembl Gene ID:

ENSAPLG00000014408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015049

34186308 - 34189875

3568