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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34190736_34190806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34190736 - 34190806

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTCCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

GTGACAGTAACG

Flanking Amino Acid:

LDFCDPDSAKFQQCLAEVHA

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

64.9

41.2

Major BPS

54.4

0.11

1.2

36.4

Major PPT

75.7

0.58

0.8

72.9

Minor 5ss

32.7

-2

3.1

40.1

Minor BPS

45.3

-0.5

2.3

54.24

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041425

34189896 - 34194333

4438

ENSAPLT00000027032

34189896 - 34194333

4438