Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_34190905_34191032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34190905 - 34191032

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGGGGC

5'SS Class:

major

3'SS Sequence:

GTGTCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATTTTCTTATCC

Flanking Amino Acid:

MEAAFGGSTLGGRNSHFTVE

Intron Amino Acid Position:

610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

59.3

39.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

73.1

0.52

0.9

62.9

39.6

Minor 5ss

23.7

-3

3.3

23.4

37.6

Minor BPS

72.2

0.68

1.5

80.35

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041425

34189896 - 34194333

4438

ENSAPLT00000027032

34189896 - 34194333

4438