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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34191400_34191466_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34191400 - 34191466

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

CGGGAGCTCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GCATCCTGACGG

Flanking Amino Acid:

AVWHLRAMVERLLAEREVVL

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

55.5

0.13

46.1

41.2

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

43.9

-0.6

45.66

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041425

34189896 - 34194333

4438

ENSAPLT00000027032

34189896 - 34194333

4438