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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34201943_34206463_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34201943 - 34206463

Intron Length:

4521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCGAAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGAAAT

U12 Branch Point Sequence:

TGGTTCTGCACC

Flanking Amino Acid:

CYLVMGEGHKVFFFCCCC*

Intron Amino Acid Position:

817

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

0.05

1.3

44.6

Major PPT

45.5

-0.2

1.7

47.8

39.5

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

49.7

-0

1.9

63.45

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043415

34201916 - 34226021

24106