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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34204086_34204162_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34204086 - 34204162

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTGTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

GGATTTTGAGCT

Flanking Amino Acid:

EFPYVNLHNEVVGIIESHAR

Intron Amino Acid Position:

953

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

88.9

24.6

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

73.6

0.53

0.9

67.8

37.6

Minor 5ss

37.5

-1.4

2.8

51.2

45.3

Minor BPS

48.1

-0

1.6

63.12

40.7

Associated Gene:

Gene:

NUP160

Ensembl Gene ID:

ENSAPLG00000015048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015795

34200546 - 34226056

25511